Equipe 2 : Processus fonctionnels et cycles
biogéochimiques
Thème 1 : Microbiologie
2002 et sous presse - Revues indexées
CRIQUET S. 2002. Measurement and characterization of cellulase activity in
schlerophyllous forest litter, Journal of
Microbiological Methods, 50: 165-173. (IF=
1,512)
CRIQUET S., FARNET A-M. & FERRÉ E. 2002, Protein measurement in forest litter, Biology and Fertility of Soils, 35 : 307-313. (IF= 1,307)
CRIQUET S., JONER E. & LEYVAL C. 2002. 2,7-Diaminofluorène is a sensitive substrate for detection and characterization of plant root peroxidase activities, Plant Science. (Sous Presse). (IF= 1,259)
CRIQUET S., TAGGER S., VOGT G. & LE PETIT J. 2002, Endoglucanase and b-glycosidase activities in an evergreen oak litter : Annual variation and regulating factors. Soil Biology and Biochemistry, 34 : 1111-1120. (IF= 1,747)
FARNET A-M., CRIQUET S., POCACHARD E., GIL G., FERRÉ E. 2002, Effect of an induced laccase pn aromatic
compounds. Purification of a new isoform of laccase from a Marasmius quercophilus
strain isolated from a cork oak litter (Quercus
suber L.). Mycologia , 94 : 735-740. (IF=1,508)
FERRÉ
E., N'GUYEN M-H., LE PETIT J., GIL G. 2002,
Microbial oxidation of amines: A preliminary investigation on the resolution of
racemic1-phenylethylamine. Biocatalysis
and biotransformation, 20 : 311-317. (IF= 1,309)
GUYONEAUD
R., S. MOUNÉ, C. EATOCK, V. BOTHOREL, A. HIRSCHLER-RÉA.,
J. C. WILLISON, R. DURAND, W. LIESACK, R. HERBERT, R. MATHERON & P.
CAUMETTE. 2002. Characterization of three spiral-shaped purple non sulfur
bacteria isolated from coastal lagoon sediments, saline sulfur springs and
microbial mats: emended description of the genus Roseospira and description of Roseospira
marina sp. nov., Roseospira navarrense sp. nov. and Roseospira thiosulfatophila sp. nov. Arch. Microbiol.,
178, 315-324. (IF=2,056)
HIRSCHLER-RÉA A., R. MATHERON, C.
RIFFAUD, S. MOUNÉ, C. EATOCK, R. HERBERT, J. C. WILLISON & P. CAUMETTE.
2002. Isolation and characterization of spirilloid purple
phototrophic bacteria forming red layers in
Mediterranean salterns, and description of Halorhodospira
neutriphila sp. nov., emendation of the genus Halorhodospira. Int. J. Syst. Evol. Microbiol. (sous presse). (IF=2,675)
Klonowska A., Gaudin C., Fournel A., Asso M., Le Petit J., Giorgi M., Tron T. 2002. Characterization of a low redox potential laccase from the basidiomycete C30. European Journal of Biochemistry, 269 :6119-6125
MARCHAND
D. , V. GROSSI, A. HIRSCHLER-RÉA & J.-F.
RONTANI. 2002. Regiospecific enzymatic oxygenation of cis-vaccenic acid during
aerobic senescence of the halophilic purple sulfur bacterium Thiohalocapsa halophila. Lipids, 37, 541-548.
(IF= 1,769)
Willison J, Moune S, Matheron R, Caumette P. Molecular sequence analysis of prokaryotic diversity in anoxic sediments underlying cyanobacterial mats of two hypersalin ponds in Mediterranean salterns. FEMS Microbiol Ecol, accepted date: 27-11-2002
2002 - Autres publications
HIRSCHLER-RÉA A., M. PIGACHE, V. CALVERT &
R. MATHERON.
Anaerobic hydrocarbons biodegradation under different
reducing conditions in microbial mats. Xth
International Congress of Bacteriology and Applied Microbiology. 27
juillet-1er août 2002, Paris
KLONOWSKA A.,
LE PETIT J. & TRON T.
Relations structure-activité dans les laccases fongiques. 8ème
Rencontres de Chimie Organique Biologique, 26-30 Mars 2000, p. 92, Aussois,
France
2001 - Revues indexées
ANGLADE J-Y., HIRSCHLER A., LE PETIT J., MATHERON
R., SCARPITTA A., IACAZIO G. 2001. Response
of electrically stimulated cells of Pseudomonas
oleovorans strain ATCC 29347 suspended in silicone oil. FEMS Microbiology Letters, 199 :119-123. (IF=1,615)
CHATELLIER
X., BOTTERO J-Y.& LE PETIT J. 2001.
Adsorption of a cationic polyelectrolyte on Escherichia
coli bacteria : 1. Adsorption
of the polymer. Langmuir, 17:2782-2790. ( IF= 3,045).
CHATELLIER
X., BOTTERO J-Y.& LE PETIT J. 2001.
Adsorption of a cationic polyelectrolyte on Escherichia coli bacteria :
2. Interactions between the bacterial surfaces covered with the polymer. Langmuir, 17 :2791-2800.
(IF= 3,045).
KLONOWSKA A., LE PETIT J., TRON T. 2001. Enhancement of minor laccase production in the basidiomycete Marasmius quercophilus C30. FEMS Microbiology Letters, 9948 :1-6. (IF= 1,615)
LAMBERT
S., MOUSTIER S., BARAKAT M., BOTTERO J-Y., LE PETIT
J., GINESTET P. 2001. Analysis of the structure of very large bacterial
aggregates by small angle multiple light scattering and confocal image
analysis. Environmental Science and Technology. Lipids, (IF=1,769).
2000 - Revues indexées
CHAHINIAN H., VANOT G., IBRIK A., RUGANI N., SARDA L.& COMEAU L.C. 2000. Production of extracellular lipases by Penicillium cyclopium, purification and
characterisation of a partial acylglycerol lipase. Bioscience Biotechnology Biochemistry,
64:215-222. (IF = 1,039)
CHARNI N., PÉRISSOL C., LE PETIT J.&
RUGANI N. 2000. Production and
characterization of monoclonal antibodies against vegetative cells of Bacillus cereus. Applied and Environmental
Microbiology, 66: 2278-2281. (IF=3.389)
CRIQUET S, FARNET A-M., TAGGER S. & LE PETIT J. 2000. Annual variations of phenoloxidase activities in an evergreen oak litter. Influence of certain biotic and abiotic factors. Soil Biology and Biochemistry, 32: 1505-1513. (IF= 1,747)
CRIQUET S., JONER
E. & LEYVAL C. 2000. Anthracene and
mycorrhiza affect the activity of oxidoreductases in the roots and the
rhizosphere of lucerne (Medicago sativa
L.). Biotechnology Letters, 22:1733-1737. (IF= 0,967)
DÉDEYAN B., KLONOWSKA A., TAGGER S.,
TRON T., IACAZIO G., GIL G., LE PETIT J. 2000. Biochemical and
molecular characterization of a laccase from Marasmius quercophilus.
Applied and Environmental Microbiology, 66, 3:925-929. (IF=3,389)
FARNET A-M., CRIQUET S., TAGGER S., GIL G., LE PETIT J. 2000. Purification, partial characterization and reactivity with aromatic compounds of two laccases from Marasmius quercophilus strain 17. Canadian Journal of Microbiology, 46:1-6. (IF= 1,105)
GAUDIN C., BELAICH A., CHAMP S., BELAICH J-P. 2000. CelE, a multidomain cellulase from Clostridium cellulolyticum: a key enzyme in the cellulosome. Journal of Bacteriology, 182:1910-1915. (IF=3,506); ( IF= 3,506).
GROSSI
V., RAPHEL D., HIRSCHLER-REA A., GILEWICZ M;,
MOUZDAHIR A., BERTRAND J-C., RONTANI J-F. 2000. Anaerobic biodegradation
of pristane by a marine sedimentary bacterial community. Organic Geochemistry,
31:769-772. (IF=1,390)
IACAZIO G., PERISSOL C., FAURE B. 2000. A new tannase substrate for spectrometric assay. Journal of Microbiological Methods, 3:209-214. (IF= 1,512).
MOUNÉ
S., EATOCK C., MATHERON R., WILLISON J.C., HIRSCHLER A., HERBERT
R., CAUMETTE P. 2000. Description of Orenia
salinaria sp. nov., a new fermentative bacterium
isolated from anaerobic sediments of Mediterranean salterns. International Journal of Systematic and
Evolutionary Microbiology, 50 :721-729. (IF=
2,675).
1999 - Revues indexées
CRIQUET
S., TAGGER S., VOGT G., IACAZIO G. & LE PETIT J. 1999. Laccase activity
of forest litter. Soil Biology and
Biochemistr, 31, 1239-1244. (IF= 1,747)
FARNET A-M., ROUX M., LE PETIT J. 1999. Genotypic variations among isolates of Marasmius quercophilus, a white-rot fungus isolated from evergreen
oak litter. Canadian
Journal of Botany, 77, 884-890. (IF= 0,876)
FARNET A-M., TAGGER S., LE PETIT J. 1999. Effects of copper and aromatic inducers on the laccases of
the white-rot fungus Marasmius
quercophilus. Comptes Rendus Académie des Sciences de Paris,
Sciences de la Vie, 322, 499-503. (IF= 0,98)
1999 - Autres publications
CAUMETTE P., MATHERON R., WELSH D.T.,
HERBERT P.A., DEWITT R. 1999. Ecology and osmoadaptation of halophilic Chromatiaceae in hypersalina
environments. In : The
Phototrophic Procaryotes. Peschek P.A., Loffelhardt W. and
Schmetterer G. (Eds). Kluwer Academic/ Plenum Publ., New-York,
707-713.
1998 - Revues indexées
GROSSI
V., HIRSCHLER A., RAPHEL D., RONTANI J.-F., DE
LEEUW J.W., BERTRAND J.-C. 1998. Biotransformation pathways
of phytol in recent anoxic sediments. Organic Geochemistry, 29 : 845-861. (IF=1,39)
GUYONEAUD R., DE WITT R., MATHERON R., CAUMETTE P. 1998. Impact of macroalgal dredging on dystrophic crises and phototrophic bacterial blooms (Red Waters) in a brackish coastal lagoon (Prévost Lagoon, France). Oceanologica Acta, 21 : 551-561. (IF= 0,662)
GUYONEAUD R., MATHERON R., LIESACK W., IMHOFF J.F., CAUMETTE P. 1998. Thiorhodococcus minus, gen. nov. And sp. nov., a purple sulfur bacterium isolated from coastal lagoon sediments. Archives of Microbiology, 168:16-23. (IF= 2,056)
GUYONEAUD R., SULING J., PETRI R., MATHERON R., CAUMETTE P., PFENNIG N., IMHOFF J.F. 1998. Taxonomic rearrangements of the genera Thiocapsa and Amoebobacter on the basis of 16S rDNA sequence analyses, and description of Thiolamprovum gen. nov. International Journal of Systematic Bacteriology, 48:957-964. (IF= 2,675)
HIRSCHLER A., RONTANI J.-F., RAPHEL D., MATHERON R., BERTRAND J.-C. 1998. Anaerobic
degradation of hexadecan-2-one by a microbial enrichment culture under sulfate-reducing conditions. Applied Environmental Microbiology., 64: 1576-1579. (IF=3,389)
TAGGER S., PÉRISSOL C., GIL G., VOGT G., LE PETIT J. 1998. Phenoloxidases of the white-rot fungus Marasmius quercophilus isolated from an evergreen oak litter (Quercus ilex L.). Enzyme and Microbial Technology,
23:372-379. (IF=1,411)
TARDY-JACQUENOD C., MAGOT M., PATEL B., MATHERON
R., CAUMETTE P. 1998. Desulfatomaculum halophilum
sp. nov., a halophilic sulfate-reducing bacteria
isolated from oil production facilities. International
Journal of Systematic Bacteriology, 48:333-338. (IF= 2,675)
1998 - Autres publications
GANCET C., PIRRI R., DALENS J-M., BOUTEVIN B., LOUBAT C., LE PETIT J., FARNET A-M., TAGGER S. Methodology in studying improvement of Polyacrylate Biodegradability. 5ème Int. Scientific. Workshop on Biodegradable Polymers. Macromolecular Symposium Wiley. Degradability, reniewability and recycling-kee functions for future material. Albertson, Chellini, Seigen, Scott and Vert Eds. n° 17, p. 211-217, 09-13 juin 1998, Stockholm (Suède).
Colloques 1998-2002
CRAVO C., DIAZ ALMELA E., MATHERON R.,
HIRSCHLER A. Isolation of sulfate reducing bacteria oxidizing
1-tetradecene from hydrocarbon polluted marine sediment. Biodepol’99 – Biotechnology in Environmental
Protection European Symposium., 26-27 octobre 1999, Rennes
CRAVO C., GROSSI V., MATHERON R., HIRSCHLER-RÉA A. Oxydation du
tétradécane par des bactéries sulfato-réductrices de deux communautés marines.
Colloque de Microbiologie anaérobie, Société Française de Microbiologie, 5 et 6
Avril 2000, Lyon.
CRAVO C., HIRSCHLER
A., GROSSI V., MATHERON R. Anaerobic biodegradation of tetradecane in
oil polluted marine environments. Biodepol’99
– Biotechnology in Environmental Protection European Symposium. 26-27 octobre
1999, Rennes
CRAVO C., MATHERON R., CAYOL J-L., HIRSCHLER-RÉA A. Etude d’une
souche de bactéries sulfato-réductrices marines isolées sur 1-tétradécène.
Colloque de Microbiologie anaérobie, Société Française de Microbiologie, 5 et 6
Avril 2000, Lyon.
CRAVO-LAUREAU C., MATHERON R., CAYOL J-L., HIRSCHLER-RÉA A. Isolation and characterization of sulfate-reducing bacteria oxidizing alkanes and alkenes frpm hydrocarbon polluted marine sediments (Gulf of Fos, France). 9th International Symposium on Microbial Ecology : Interactions in the Microbial World, 26-31 Août 2001, Amsterdam, Pays-Bas
CRAVO-LAUREAU C., R. MATHERON, J.-L. CAYOL, V. GROSSI & A. HIRSCHLER-RÉA. Isolation and
characterization of two sulfate-reducing bacterial
strains oxidizing aliphatic hydrocarbons. Xth International
Congress of Bacteriology and Applied Microbiology. 27 juillet-1er
août 2002, Paris
CRIQUET S., FARNET A-M. Fungi producing
phenoloxidases in an evergreen oak litter. 3èmes Journées d’Ecologie Fonctionnelle, 6-9 Mars 2001, La
Londe-les- Maures
FARNET A-M., CRIQUET S., TAGGER
S., GIL G., LE PETIT J. 2000 - Purification, partial characterisation
and reactivity with aromatic compounds of two laccases from Marasmius quercophilus strain 17. 8ème Rencontres de Chimie
Organique Biologique, 26-30 Mars
2000, p. 58, Aussois, France
Farnet A.M., Criquet S.,
Le Petit J., Vogt G.,
Les laccases : rôle dans la dégradation de composés phénoliques polluants,
Colloque ADEME Energies 2002, Pollutec, 26-29 novembre, Lyon Eurexpo
GROSSI V., RAPHEL D., HIRSCHLER A.,
GILEWICZ M., MOUZDAHIR A., CURY P., BONIN P., BERTRAND J-C., RONTANI J-F. Anaerobic biodegradation of acyclic hydrocarbons in modern sediments : effects of branching, unsaturation and
co-substrate. 19ème Congrès de Géochimie Organique, Septembre 1999,
Istanbul
Hirschler-Réa A., Pigache M., Calvert V., and Matheron R. Anaerobic hydrocarbons biodegradation under different reducing conditions in microbial mats. Xth International Congress of Bacteriology and Applied Microbiology. 27th July – 1st August 2002, Paris
KLONOWSKA A., LE PETIT J. & TRON T.
Expression hétérologue de laccases fongiques. 2ème Réunion du Groupe
Physique et Chimie des Métalloenzymes. 24-27 Janvier 1999, Valloire (France)
LAMBERT S., BOTTERO J-Y., MOUSTIER S., LE PETIT
J., DUSSOUILLEZ P., GINESTET P. 2000. Structural and size distribution interpretation of static light
scattering pattern of bacterial aggregates. 5th Conference on Electromagnetic and light scattering
of non-spherical particles. Septembre
2000, Halifax, Canada.
MOUZDAHIR A., GROSSI V., BONIN P., MICHOTEY V., HIRSCHLER-RÉA
A., BERTRAND J.-C. &
PEREZ M-C., GIL G., FARNET A-M., TAGGER
S. & LE PETIT J. Laccases fongiques: Réactivités. 8ème
Rencontres de Chimie Organique Biologique, 26-30 Mars 2000, p. 59, Aussois, France
Périssol C., Nèble S., Le
Petit J., Vogt G.,
Valorisation des boues de station d’épuration en milieu syvo-pastoral. Impact
de leur épandage sur l’activité et la biodversité des microorganismes du sol. Colloque
ADEME Energies 2002, Pollutec, 26-29 novembre, Lyon Eurexpo
PERNIN C., NEBLE S., PERISSOL C., POINSOT-BALAGUER N. Impact de l’épandage des boues de station
d’épuration sur la qualité du sol dans
un contexte sylvo-pastoral. Actes de Colloque “Logistique des épandages des
effluents d’élevage, des boues de stations d’épuration et des déchets industriels”,
8-9 Octobre 2001, Vichy, 237-240.
RONTANI
J.-F. Biodegradation of squalene by denitrifying or
sulfate-reducing marine microbial communities: involvement of abiotic
degradation processes. IMOG, 2001,
Nancy
TAGGER S., PERISSOL C., GIL G., TOUTAIN F. & LE PETIT J. Fungal activity in humus
and soil of evergreen oak forest (Quercus
ilex L.). 3èmes
Journées d’Ecologie Fonctionnelle, 6-9 Mars 2001, La Londe-les- Maures